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Succinylation Proteomics

Succinylation Proteomics

Specific Antibody Enrichment for Accurate Lysine Succinylation Detection
Advanced 4D Label-Free LC-MS/MS for Sensitive Site-Level Quantification
In-depth Bioinformatics for Pathway Enrichment and Functional Insights
Publication-Ready Data for Biomarker Discovery and Disease Research

What Is Succinylation and Why Is It Important?

Succinylation is an acylation modification in which a succinyl group, derived from succinyl-CoA—an intermediate in the tricarboxylic acid (TCA) cycle—is transferred to lysine residues on proteins, either catalyzed by succinyltransferases or occurring non-enzymatically under certain conditions. Like other acylation modifications, such as acetylation and lactylation, succinylation regulates essential cellular processes, including energy metabolism, mitochondrial dynamics, and the cellular stress response. Disruption of succinylation patterns has been implicated in several key disease areas, including metabolic disorders (e.g., diabetes, non-alcoholic fatty liver disease), cancer metabolism and tumor progression, and neurodegenerative diseases. Consequently, succinylation profiling is emerging as a powerful tool for biomarker discovery and mechanistic investigation.

MetwareBio offers a specialized succinylation proteomics analysis service that combines high-specificity antibody enrichment with cutting-edge 4D label-free LC-MS/MS technology. Our optimized workflow ensures the sensitive detection and quantification of succinylated peptides at the site level, providing reliable insights into the dynamics of succinylation across a wide range of sample types. Integrated bioinformatics—encompassing functional annotation, pathway enrichment, motif analysis, and multi-omics integration—enables researchers to uncover the regulatory roles of succinylation in metabolic regulation, mitochondrial function, and disease mechanisms.

Enzymatic and non-enzymatic lysine succinylation. (Zhao et al., 2022)

Why Choose MetwareBio for Succinylation Proteomics Analysis?

Unmatched Expertise in Acylation Modifications
MetwareBio brings years of expertise in analyzing various acylation modifications, including succinylation, acetylation, and lactylation. Our comprehensive understanding of post-translational modifications (PTMs) enables us to deliver reliable and reproducible results in proteomics and metabolic research.
High-Sensitivity Detection with Advanced LC-MS/MS Technology
We utilize state-of-the-art 4D label-free LC-MS/MS technology to provide accurate, high-resolution detection and quantification of succinylation sites. This cutting-edge platform ensures sensitive analysis of low-abundance succinylated peptides across a broad range of sample types, from cell lines and tissues to microorganisms and biofluids.
Comprehensive Bioinformatics and Functional Insights
Our advanced bioinformatics pipeline integrates pathway enrichment, motif analysis, and multi-omics data to offer in-depth functional insights into succinylation’s role in metabolism, mitochondrial function, and disease mechanisms. We ensure that all data are interpreted within the biological context, providing you with meaningful results that are both scientifically relevant and actionable.
Publication-Ready, High-Quality Data
We understand the importance of delivering publication-ready data that meets the highest scientific standards. Our results come with detailed functional annotations, statistical analysis, and clear visualizations, making them ready for your publications, presentations, and further research applications. Whether you're exploring new mechanisms or validating therapeutic targets, our data will support your efforts at every stage.
Customizable Workflow Tailored to Your Research Needs
MetwareBio offers a flexible approach to succinylation proteomics, tailoring workflows to suit your specific research goals. Whether you are conducting discovery-driven research, mechanistic studies, or biomarker validation, our team provides personalized support to ensure your project’s success.

Succinylation Proteomics Workflow Using LC-MS/MS

MetwareBio offers a comprehensive, high-resolution workflow for identifying lysine succinylation sites and quantitatively profiling succinylation events. Starting with high-quality biological samples, we integrate optimized protein extraction, antibody-based enrichment, and advanced LC-MS/MS analysis to ensure precise and thorough characterization of succinylation modifications. All data are processed through a robust bioinformatics pipeline, including quality control, site-specific quantification, functional annotation, pathway enrichment, motif analysis, and protein–protein interaction network mapping, providing in-depth, publication-ready insights into succinylation-mediated regulatory mechanisms in metabolism, mitochondrial function, and disease processes.
1
Sample Shipment
2
Protein Extraction
3
Trypsin Digestion
4
Lysine-succinylated Peptides Enrichment
5
LC-MS/MS
Detection
6
Data Analysis

Succinylation Proteomics Service Deliverables

MetwareBio provides high-confidence identification and quantitative profiling of lysine succinylation sites, supported by stringent quality control and comprehensive bioinformatics analysis. Our deliverables include site-level mapping and quantification of succinylated peptides, PCA and correlation evaluation to ensure sample consistency, and differential analysis to identify biologically significant changes. Functional annotations—such as Gene Ontology (GO), KEGG pathways, KOG classification, and protein domain analysis—are integrated with motif discovery, subcellular localization prediction, and protein–protein interaction network mapping, providing deep insights into the regulatory roles of succinylation in metabolism, mitochondrial function, and disease mechanisms. All results are compiled into publication-ready data tables and high-quality visualizations, facilitating easy interpretation and supporting downstream biological discovery, translational research, and manuscript preparation. Contact Us for Demo
Volcano Plot
Clustering Heatmap
Motif Sequence Logo
GO Enrichment
KEGG Pathway Map
KOG Enrichment
Subcellular Localization
Protein–Protein Interaction Network
Signal Peptide Prediction Map

Applications of Succinylation Analysis in Research

Succinylation in Metabolic Regulation and Metabolic Diseases

Succinylation plays a pivotal role in linking cellular metabolism to protein function, particularly in the regulation of energy production and metabolic pathways. By modifying enzymes involved in glycolysis, TCA cycle, and fatty acid metabolism, succinylation adjusts cellular energy states in response to metabolic demands. This modification regulates key processes such as ATP production, lipid synthesis, and protein synthesis, influencing how cells adapt to nutrient availability and stress conditions. Altered succinylation patterns have been implicated in metabolic disorders like obesity, diabetes, and non-alcoholic fatty liver disease, making succinylation a crucial focus for studying metabolic health and disease.

Succinylation in Mitochondrial Function and Energy Homeostasis

Mitochondria are central to cellular energy production, and succinylation directly impacts their function. By modulating mitochondrial proteins involved in oxidative phosphorylation and the electron transport chain, succinylation plays a key role in maintaining energy homeostasis. This modification regulates mitochondrial dynamics, including mitochondrial biogenesis, fusion/fission processes, and ATP synthesis. Disruptions in succinylation have been linked to mitochondrial dysfunction, which is a hallmark of numerous neurological disorders, cardiovascular diseases, and aging. Investigating succinylation in mitochondria provides insights into how energy production is regulated and offers potential therapeutic avenues for mitochondrial diseases and age-related pathologies.

Succinylation in Cancer Metabolism and Tumor Progression

Cancer cells exhibit metabolic reprogramming that supports rapid growth and survival. Succinylation plays a significant role in this metabolic shift by modulating proteins involved in cell cycle progression, energy metabolism, and tumorigenesis. This modification regulates enzymes associated with key processes like aerobic glycolysis, lipid metabolism, and protein synthesis, all of which are crucial for cancer cell proliferation. Succinylation also impacts oncogene activity, immune evasion, and tumor microenvironment dynamics. Understanding how succinylation influences cancer metabolism can uncover new therapeutic targets and biomarkers, aiding in the development of personalized cancer therapies and novel anticancer drugs.

Succinylation in Neurological Function and Neurodegenerative Diseases

Succinylation is increasingly recognized as a key regulatory modification in the nervous system, influencing neurotransmission, synaptic plasticity, and neuronal survival. This modification has been linked to neurodegenerative diseases such as Alzheimer’s, Parkinson’s, and Huntington’s disease, where disrupted succinylation patterns contribute to neuroinflammation, protein aggregation, and oxidative stress. Succinylation regulates proteins involved in neurodegenerative processes, neuronal signaling, and mitochondrial function, all of which are critical to maintaining neuronal health. Profiling succinylation in neurological contexts offers potential for identifying biomarkers and novel therapeutic strategies for treating neurodegenerative diseases.

Sample Requirements for Succinylation Analysis

MetwareBio’s succinylation proteomics workflow is fully compatible with a wide variety of biological sample types, supported by our robust sample pretreatment and protein extraction capabilities. We can process animal and plant tissues, primary cells and cultured cell lines, microorganisms including bacteria and fungi, as well as pre-extracted or purified protein samples. Refer to the recommended amounts below:

Category Sample Type Recommended
Sample Size
Minimum
Sample Size
Animal Tissue Normal Tissues (Heart, Liver, Spleen, Lung, Kidney), Red Bone Marrow, Soft-bodied Insects 100 mg 50 mg
Chitinous Insects 2 g 1 g
Yellow Bone Marrow 200mg 100mg
Plant Tissue Young Leaves, Petals, Callus 1 g 500 mg
Mature leaves, Stems, Algae, Macrofungi 2 g 1 g
Bark, Roots, and Fruits 5 g 3 g
Cell Primary Cells 2×10^7 /
Sperm, Platelets 4×10^8 2×10^8
Passaged Cells 2×10^7 /
Microorganism Bacteria 500 mg 200mg
Fungi 1 g 500 mg
Protein Protein Solution 5 mg 3 mg
  • At least 3 biological replicates are recommended. For animal models, 3–6 subjects are suggested; for clinical samples, 6–10 cases are advised.
  • Please refer to our Sample Preparation Handbook and Sample Submission Guidelines for detailed instructions, or contact us for customized support.

FAQ on Succinylation Proteomics

What is lysine succinylation and how does it affect protein function?

Lysine succinylation is a post-translational modification (PTM) where a succinyl group, derived from succinyl-CoA, is covalently attached to the lysine residue of a protein. This modification can affect protein function by altering enzyme activity, protein stability, subcellular localization, and protein-protein interactions. It plays a crucial role in regulating cellular metabolism, mitochondrial function, and stress responses, and has been implicated in various diseases such as cancer, neurodegenerative disorders, and metabolic diseases.

How is succinylation detected and quantified in proteomics?

Succinylation is typically detected using high-specificity antibody-based enrichment methods that capture succinylated peptides from complex biological samples. These peptides are then analyzed using LC-MS/MS (liquid chromatography-tandem mass spectrometry) to identify and quantify succinylation sites with high sensitivity. The data is further processed through bioinformatics pipelines, which include site-specific quantification, functional annotation, and pathway enrichment analysis to gain deeper insights into succinylation-mediated regulatory mechanisms.

What types of samples are suitable for succinylation proteomics analysis?

Our succinylation proteomics service can analyze a wide range of biological samples, including animal tissues, plant tissues, cell lines, microorganisms, and biofluids. Whether you are studying metabolic pathways, disease models, or stress responses, our platform is capable of handling diverse sample types to detect succinylation modifications in various biological contexts.

How does succinylation differ from other acylation modifications like acetylation or lactylation?

Succinylation, like acetylation and lactylation, is a type of acylation modification, but it involves the transfer of a succinyl group from succinyl-CoA to lysine residues on proteins. While acetylation typically regulates gene expression and chromatin structure, succinylation is more closely associated with metabolic regulation, mitochondrial function, and energy production. Each acylation modification has its unique biological function and regulatory role in different cellular processes, making them key targets for understanding cellular homeostasis and disease mechanisms.

How does succinylation play a role in cancer metabolism and tumor progression?

In cancer cells, metabolic reprogramming is a hallmark of tumor growth and survival. Succinylation modifies key metabolic enzymes that control pathways like glycolysis, oxidative phosphorylation, and lipid metabolism, thereby influencing cancer cell proliferation and energy metabolism. By regulating proteins involved in cell cycle progression and apoptosis, succinylation plays a crucial role in tumor progression and the development of chemoresistance, making it an important area of research for cancer therapy.

Why is it important to integrate succinylation data with global proteomics?

Integrating succinylation data with global proteomics is crucial for a comprehensive understanding of how succinylation affects cellular processes. By combining succinylation profiling with global protein expression data, researchers can distinguish whether phenotypic changes are driven by altered modification levels (succinylation) or changes in protein expression. This integration enables a deeper analysis of how post-translational modifications (PTMs) like succinylation influence protein function, metabolic reprogramming, and disease progression, providing more accurate and biologically relevant insights into complex cellular phenotypes.

Reference

Zhao G, Zhen J, Liu X, et al. Protein post-translational modification by lysine succinylation: Biochemistry, biological implications, and therapeutic opportunities. Genes Dis. 2022;10(4):1242-1262. Published 2022 Apr 7. doi:10.1016/j.gendis.2022.03.009

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